I guess this is unlikely to get a response, but I downloaded this profile the other day, followed the instructions and it worked great. Really impressed! in fact if i can get it to work again it will be my sole reason for buying the software (30 day trial currently).
However i haven't managed to get it to work since. I'm running windows 7 and using the windows 98 comparability mode to run freespace. I've checked the profile using notepad to check it's spitting out the right key commands in windows when enabled, but it just doesn't seem to communicate to the game when it's running.
You need to start Pinnacle Game Profiler as Administrator, because windows is blocking the signals from reaching PGP.
It seems I have to apologize again, haven't been on the PGP forums for close to 1 year now. I'm really too far removed to trouble shoot this profile. All I can tell you is that it will work, you've got to follow the instructions precisely. I remember thinking twice before uploading this one to the forum. It was such a difficult and complex profile I knew it was bound to cause a lot of problems for people, but I figured even if 10% of the people get it working, it's better than nothing.
Smasha - Right stick isn't meant to control pitch, only throttle (up/down), and roll (left/right). You have to delete the right stick's in-game assignment which is Joystick Y Axis, otherwise you'll get the PGP and in-game commands competing with eachother.
Robin - I hope Errol's suggestion worked for you.